Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Golph3-205ENSMUST00000228671 2842 ntBASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Gm11927-201ENSMUST00000118472 759 ntBASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Trav6d-4Q5R1I0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Gm5643-201ENSMUST00000117081 966 ntBASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6d-4Q5R1I0 Iqck-206ENSMUST00000208658 2891 ntBASIC15.27■□□□□ 0.04
Trav6d-4Q5R1I0 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.27■□□□□ 0.04
Trav6d-4Q5R1I0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav6d-4Q5R1I0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav6d-4Q5R1I0 Gm18666-201ENSMUST00000190039 958 ntBASIC15.27■□□□□ 0.04
Trav6d-4Q5R1I0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-4Q5R1I0 Zfp783-201ENSMUST00000095946 670 ntBASIC15.27■□□□□ 0.04
Trav6d-4Q5R1I0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6d-4Q5R1I0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6d-4Q5R1I0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6d-4Q5R1I0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6d-4Q5R1I0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Gm13158-201ENSMUST00000122007 736 ntBASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-4Q5R1I0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-4Q5R1I0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms