Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps41Q5KU39 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps41Q5KU39 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps41Q5KU39 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Vps41Q5KU39 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps41Q5KU39 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Vps41Q5KU39 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps41Q5KU39 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps41Q5KU39 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Vps41Q5KU39 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.98■□□□□ 0.63
Vps41Q5KU39 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps41Q5KU39 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps41Q5KU39 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps41Q5KU39 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Gm26833-201ENSMUST00000180899 440 ntBASIC18.97■□□□□ 0.63
Vps41Q5KU39 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Gm6139-201ENSMUST00000079261 882 ntBASIC18.97■□□□□ 0.63
Vps41Q5KU39 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps41Q5KU39 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.97■□□□□ 0.63
Vps41Q5KU39 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps41Q5KU39 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps41Q5KU39 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.96■□□□□ 0.63
Vps41Q5KU39 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps41Q5KU39 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps41Q5KU39 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.96■□□□□ 0.63
Vps41Q5KU39 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps41Q5KU39 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps41Q5KU39 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps41Q5KU39 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps41Q5KU39 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.95■□□□□ 0.62
Vps41Q5KU39 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Gm12821-201ENSMUST00000120022 600 ntBASIC18.95■□□□□ 0.62
Vps41Q5KU39 Gm45417-201ENSMUST00000209533 758 ntBASIC18.95■□□□□ 0.62
Vps41Q5KU39 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.95■□□□□ 0.62
Vps41Q5KU39 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps41Q5KU39 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.94■□□□□ 0.62
Vps41Q5KU39 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Gm43017-201ENSMUST00000198296 752 ntBASIC18.94■□□□□ 0.62
Vps41Q5KU39 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps41Q5KU39 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps41Q5KU39 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps41Q5KU39 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps41Q5KU39 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps41Q5KU39 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps41Q5KU39 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps41Q5KU39 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Vps41Q5KU39 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps41Q5KU39 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms