Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28bQ45KJ6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28bQ45KJ6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28bQ45KJ6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.29■□□□□ 0.36
Lin28bQ45KJ6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Gm15565-201ENSMUST00000118890 427 ntBASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Zfp783-201ENSMUST00000095946 670 ntBASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28bQ45KJ6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Lin28bQ45KJ6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lin28bQ45KJ6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lin28bQ45KJ6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lin28bQ45KJ6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lin28bQ45KJ6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lin28bQ45KJ6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Gm37055-201ENSMUST00000191866 133 ntBASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28bQ45KJ6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28bQ45KJ6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28bQ45KJ6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lin28bQ45KJ6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms