Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cops9Q3U898 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Cops9Q3U898 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cops9Q3U898 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cops9Q3U898 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.56□□□□□ -0.4
Cops9Q3U898 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops9Q3U898 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops9Q3U898 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cops9Q3U898 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops9Q3U898 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops9Q3U898 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops9Q3U898 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops9Q3U898 Gm10420-201ENSMUST00000121713 882 ntBASIC12.55□□□□□ -0.4
Cops9Q3U898 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.55□□□□□ -0.4
Cops9Q3U898 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.55□□□□□ -0.4
Cops9Q3U898 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops9Q3U898 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cops9Q3U898 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops9Q3U898 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cops9Q3U898 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cops9Q3U898 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cops9Q3U898 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Cops9Q3U898 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cops9Q3U898 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12.54□□□□□ -0.4
Cops9Q3U898 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops9Q3U898 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cops9Q3U898 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Cops9Q3U898 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.53□□□□□ -0.4
Cops9Q3U898 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cops9Q3U898 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.53□□□□□ -0.4
Cops9Q3U898 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cops9Q3U898 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cops9Q3U898 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops9Q3U898 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.52□□□□□ -0.4
Cops9Q3U898 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.52□□□□□ -0.4
Cops9Q3U898 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cops9Q3U898 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.52□□□□□ -0.4
Cops9Q3U898 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cops9Q3U898 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cops9Q3U898 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cops9Q3U898 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cops9Q3U898 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cops9Q3U898 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cops9Q3U898 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.52□□□□□ -0.41
Cops9Q3U898 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.52□□□□□ -0.41
Cops9Q3U898 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.52□□□□□ -0.41
Cops9Q3U898 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cops9Q3U898 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.52□□□□□ -0.41
Cops9Q3U898 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops9Q3U898 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms