Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Khdc4Q3TCX3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Khdc4Q3TCX3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Khdc4Q3TCX3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Mir7071-201ENSMUST00000184847 69 ntBASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Khdc4Q3TCX3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Khdc4Q3TCX3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Khdc4Q3TCX3 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Khdc4Q3TCX3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Gm2559-201ENSMUST00000201323 363 ntBASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Khdc4Q3TCX3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms