Protein–RNA interactions for Protein: Q3SXB8

Colec11, Collectin-11, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colec11Q3SXB8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.46■□□□□ 0.55
Colec11Q3SXB8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Colec11Q3SXB8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Colec11Q3SXB8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Colec11Q3SXB8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Gm10653-202ENSMUST00000139570 835 ntBASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.45■□□□□ 0.54
Colec11Q3SXB8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.45■□□□□ 0.54
Colec11Q3SXB8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Colec11Q3SXB8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Colec11Q3SXB8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Colec11Q3SXB8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Colec11Q3SXB8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.44■□□□□ 0.54
Colec11Q3SXB8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Colec11Q3SXB8 Gm20760-201ENSMUST00000179197 648 ntBASIC18.44■□□□□ 0.54
Colec11Q3SXB8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Colec11Q3SXB8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Colec11Q3SXB8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Colec11Q3SXB8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Colec11Q3SXB8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Gm44549-201ENSMUST00000208351 577 ntBASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Colec11Q3SXB8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Colec11Q3SXB8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 Gm2559-201ENSMUST00000201323 363 ntBASIC18.4■□□□□ 0.54
Colec11Q3SXB8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Colec11Q3SXB8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Colec11Q3SXB8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.39■□□□□ 0.53
Colec11Q3SXB8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Colec11Q3SXB8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Colec11Q3SXB8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.39■□□□□ 0.53
Colec11Q3SXB8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Colec11Q3SXB8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Colec11Q3SXB8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.39■□□□□ 0.53
Colec11Q3SXB8 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.39■□□□□ 0.53
Colec11Q3SXB8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms