Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx1P63006 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx1P63006 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx1P63006 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx1P63006 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx1P63006 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx1P63006 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx1P63006 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx1P63006 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.88■□□□□ 0.45
Lhx1P63006 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx1P63006 Gm10812-201ENSMUST00000099864 546 ntBASIC17.88■□□□□ 0.45
Lhx1P63006 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Lhx1P63006 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx1P63006 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx1P63006 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Lhx1P63006 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.88■□□□□ 0.45
Lhx1P63006 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx1P63006 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx1P63006 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.88■□□□□ 0.45
Lhx1P63006 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx1P63006 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.87■□□□□ 0.45
Lhx1P63006 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx1P63006 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx1P63006 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Lhx1P63006 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Lhx1P63006 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.87■□□□□ 0.45
Lhx1P63006 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.87■□□□□ 0.45
Lhx1P63006 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx1P63006 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx1P63006 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx1P63006 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx1P63006 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx1P63006 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.86■□□□□ 0.45
Lhx1P63006 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx1P63006 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx1P63006 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Lhx1P63006 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx1P63006 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx1P63006 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx1P63006 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.86■□□□□ 0.45
Lhx1P63006 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.86■□□□□ 0.45
Lhx1P63006 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.86■□□□□ 0.45
Lhx1P63006 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx1P63006 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Lhx1P63006 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx1P63006 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx1P63006 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Lhx1P63006 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx1P63006 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx1P63006 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx1P63006 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.86■□□□□ 0.45
Lhx1P63006 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.85■□□□□ 0.45
Lhx1P63006 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.85■□□□□ 0.45
Lhx1P63006 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.85■□□□□ 0.45
Lhx1P63006 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 Gm10138-203ENSMUST00000206952 366 ntBASIC17.85■□□□□ 0.45
Lhx1P63006 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.85■□□□□ 0.45
Lhx1P63006 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.85■□□□□ 0.45
Lhx1P63006 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lhx1P63006 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lhx1P63006 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.84■□□□□ 0.45
Lhx1P63006 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Lhx1P63006 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lhx1P63006 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Lhx1P63006 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Lhx1P63006 Gm15378-201ENSMUST00000121894 207 ntBASIC17.84■□□□□ 0.45
Lhx1P63006 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.84■□□□□ 0.45
Lhx1P63006 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lhx1P63006 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
Lhx1P63006 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lhx1P63006 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lhx1P63006 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lhx1P63006 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lhx1P63006 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lhx1P63006 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lhx1P63006 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lhx1P63006 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Lhx1P63006 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.83■□□□□ 0.44
Lhx1P63006 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Lhx1P63006 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.83■□□□□ 0.44
Lhx1P63006 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.83■□□□□ 0.44
Lhx1P63006 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lhx1P63006 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lhx1P63006 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.83■□□□□ 0.44
Lhx1P63006 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lhx1P63006 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Lhx1P63006 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx1P63006 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx1P63006 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.82■□□□□ 0.44
Lhx1P63006 Mtag2-201ENSMUST00000058665 714 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms