Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cks2P56390 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cks2P56390 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cks2P56390 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cks2P56390 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.2■□□□□ 0.02
Cks2P56390 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.2■□□□□ 0.02
Cks2P56390 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cks2P56390 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cks2P56390 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cks2P56390 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cks2P56390 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.2■□□□□ 0.02
Cks2P56390 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cks2P56390 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Cks2P56390 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.2■□□□□ 0.02
Cks2P56390 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.19■□□□□ 0.02
Cks2P56390 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Gm21956-201ENSMUST00000179946 522 ntBASIC15.19■□□□□ 0.02
Cks2P56390 Gm38205-201ENSMUST00000192243 258 ntBASIC15.19■□□□□ 0.02
Cks2P56390 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Cks2P56390 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks2P56390 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Cks2P56390 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.18■□□□□ 0.02
Cks2P56390 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.18■□□□□ 0.02
Cks2P56390 Gm26833-201ENSMUST00000180899 440 ntBASIC15.18■□□□□ 0.02
Cks2P56390 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.18■□□□□ 0.02
Cks2P56390 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Cks2P56390 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks2P56390 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cks2P56390 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cks2P56390 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cks2P56390 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cks2P56390 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Cks2P56390 Gm12821-201ENSMUST00000120022 600 ntBASIC15.17■□□□□ 0.02
Cks2P56390 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cks2P56390 Gm40848-201ENSMUST00000221998 324 ntBASIC15.17■□□□□ 0.02
Cks2P56390 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cks2P56390 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cks2P56390 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks2P56390 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.16■□□□□ 0.02
Cks2P56390 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cks2P56390 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cks2P56390 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.16■□□□□ 0.02
Cks2P56390 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.16■□□□□ 0.02
Cks2P56390 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.16■□□□□ 0.02
Cks2P56390 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms