Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc2P43407 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.43■□□□□ 0.86
Sdc2P43407 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc2P43407 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.43■□□□□ 0.86
Sdc2P43407 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.43■□□□□ 0.86
Sdc2P43407 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc2P43407 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.43■□□□□ 0.86
Sdc2P43407 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.43■□□□□ 0.86
Sdc2P43407 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc2P43407 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc2P43407 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sdc2P43407 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Sdc2P43407 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Sdc2P43407 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Sdc2P43407 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdc2P43407 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.41■□□□□ 0.86
Sdc2P43407 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.41■□□□□ 0.86
Sdc2P43407 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdc2P43407 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sdc2P43407 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdc2P43407 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdc2P43407 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sdc2P43407 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdc2P43407 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdc2P43407 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Sdc2P43407 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc2P43407 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Sdc2P43407 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc2P43407 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc2P43407 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.4■□□□□ 0.86
Sdc2P43407 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Sdc2P43407 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc2P43407 Gm42778-201ENSMUST00000199644 553 ntBASIC20.4■□□□□ 0.86
Sdc2P43407 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc2P43407 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc2P43407 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc2P43407 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc2P43407 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc2P43407 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sdc2P43407 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sdc2P43407 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Sdc2P43407 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sdc2P43407 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sdc2P43407 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdc2P43407 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.39■□□□□ 0.85
Sdc2P43407 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.39■□□□□ 0.85
Sdc2P43407 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdc2P43407 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.39■□□□□ 0.85
Sdc2P43407 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Sdc2P43407 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Sdc2P43407 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdc2P43407 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.39■□□□□ 0.85
Sdc2P43407 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sdc2P43407 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc2P43407 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc2P43407 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdc2P43407 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Sdc2P43407 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.37■□□□□ 0.85
Sdc2P43407 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Sdc2P43407 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Sdc2P43407 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sdc2P43407 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc2P43407 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc2P43407 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sdc2P43407 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc2P43407 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc2P43407 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc2P43407 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.36■□□□□ 0.85
Sdc2P43407 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc2P43407 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sdc2P43407 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Sdc2P43407 Gm10493-201ENSMUST00000097270 612 ntBASIC20.36■□□□□ 0.85
Sdc2P43407 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.36■□□□□ 0.85
Sdc2P43407 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc2P43407 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdc2P43407 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.36■□□□□ 0.85
Sdc2P43407 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc2P43407 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms