Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.68■□□□□ 0.58
Nfkb1P25799 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nfkb1P25799 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.68■□□□□ 0.58
Nfkb1P25799 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nfkb1P25799 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nfkb1P25799 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Nfkb1P25799 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nfkb1P25799 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Nfkb1P25799 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.67■□□□□ 0.58
Nfkb1P25799 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.67■□□□□ 0.58
Nfkb1P25799 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nfkb1P25799 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nfkb1P25799 Zfp783-201ENSMUST00000095946 670 ntBASIC18.67■□□□□ 0.58
Nfkb1P25799 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.67■□□□□ 0.58
Nfkb1P25799 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nfkb1P25799 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nfkb1P25799 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nfkb1P25799 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nfkb1P25799 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nfkb1P25799 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nfkb1P25799 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nfkb1P25799 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nfkb1P25799 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nfkb1P25799 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.66■□□□□ 0.58
Nfkb1P25799 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nfkb1P25799 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nfkb1P25799 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nfkb1P25799 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nfkb1P25799 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nfkb1P25799 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nfkb1P25799 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nfkb1P25799 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nfkb1P25799 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Nfkb1P25799 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nfkb1P25799 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.65■□□□□ 0.58
Nfkb1P25799 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nfkb1P25799 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.65■□□□□ 0.58
Nfkb1P25799 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.65■□□□□ 0.58
Nfkb1P25799 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nfkb1P25799 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.65■□□□□ 0.58
Nfkb1P25799 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nfkb1P25799 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nfkb1P25799 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Nfkb1P25799 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nfkb1P25799 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nfkb1P25799 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nfkb1P25799 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nfkb1P25799 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nfkb1P25799 Mir7071-201ENSMUST00000184847 69 ntBASIC18.64■□□□□ 0.57
Nfkb1P25799 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.64■□□□□ 0.57
Nfkb1P25799 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.64■□□□□ 0.57
Nfkb1P25799 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nfkb1P25799 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nfkb1P25799 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nfkb1P25799 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.63■□□□□ 0.57
Nfkb1P25799 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nfkb1P25799 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nfkb1P25799 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nfkb1P25799 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nfkb1P25799 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nfkb1P25799 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.63■□□□□ 0.57
Nfkb1P25799 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nfkb1P25799 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.63■□□□□ 0.57
Nfkb1P25799 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nfkb1P25799 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nfkb1P25799 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.62■□□□□ 0.57
Nfkb1P25799 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.62■□□□□ 0.57
Nfkb1P25799 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.62■□□□□ 0.57
Nfkb1P25799 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nfkb1P25799 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.62■□□□□ 0.57
Nfkb1P25799 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nfkb1P25799 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.61■□□□□ 0.57
Nfkb1P25799 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.61■□□□□ 0.57
Nfkb1P25799 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.61■□□□□ 0.57
Nfkb1P25799 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.61■□□□□ 0.57
Nfkb1P25799 Gm715-201ENSMUST00000117865 831 ntBASIC18.61■□□□□ 0.57
Nfkb1P25799 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nfkb1P25799 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.61■□□□□ 0.57
Nfkb1P25799 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms