Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfrsf1bP25119 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Gm44549-201ENSMUST00000208351 577 ntBASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Tnfrsf1bP25119 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfrsf1bP25119 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfrsf1bP25119 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tnfrsf1bP25119 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Tnfrsf1bP25119 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tnfrsf1bP25119 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tnfrsf1bP25119 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Tnfrsf1bP25119 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf1bP25119 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf1bP25119 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf1bP25119 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf1bP25119 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf1bP25119 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf1bP25119 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfrsf1bP25119 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfrsf1bP25119 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms