Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PGK1P00558 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.26■■□□□ 1.31
PGK1P00558 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PGK1P00558 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PGK1P00558 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.26■■□□□ 1.31
PGK1P00558 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.26■■□□□ 1.31
PGK1P00558 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PGK1P00558 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.26■■□□□ 1.31
PGK1P00558 AC073912.3-201ENST00000624414 853 ntBASIC23.26■■□□□ 1.31
PGK1P00558 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.26■■□□□ 1.31
PGK1P00558 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PGK1P00558 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PGK1P00558 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PGK1P00558 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.25■■□□□ 1.31
PGK1P00558 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PGK1P00558 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PGK1P00558 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.25■■□□□ 1.31
PGK1P00558 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
PGK1P00558 AC007322.3-201ENST00000426526 701 ntBASIC23.25■■□□□ 1.31
PGK1P00558 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PGK1P00558 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.25■■□□□ 1.31
PGK1P00558 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PGK1P00558 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
PGK1P00558 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.25■■□□□ 1.31
PGK1P00558 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PGK1P00558 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PGK1P00558 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.25■■□□□ 1.31
PGK1P00558 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PGK1P00558 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
PGK1P00558 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.24■■□□□ 1.31
PGK1P00558 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.24■■□□□ 1.31
PGK1P00558 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PGK1P00558 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
PGK1P00558 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PGK1P00558 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PGK1P00558 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PGK1P00558 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PGK1P00558 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PGK1P00558 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.24■■□□□ 1.31
PGK1P00558 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.24■■□□□ 1.31
PGK1P00558 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.24■■□□□ 1.31
PGK1P00558 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PGK1P00558 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PGK1P00558 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.24■■□□□ 1.31
PGK1P00558 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.23■■□□□ 1.31
PGK1P00558 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PGK1P00558 AC080038.3-201ENST00000623346 1952 ntBASIC23.23■■□□□ 1.31
PGK1P00558 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.23■■□□□ 1.31
PGK1P00558 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.23■■□□□ 1.31
PGK1P00558 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PGK1P00558 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PGK1P00558 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
PGK1P00558 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGK1P00558 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGK1P00558 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGK1P00558 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGK1P00558 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGK1P00558 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGK1P00558 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.23■■□□□ 1.31
PGK1P00558 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.23■■□□□ 1.31
PGK1P00558 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGK1P00558 AC068473.5-201ENST00000616428 2072 ntBASIC23.23■■□□□ 1.31
PGK1P00558 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
PGK1P00558 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PGK1P00558 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.23■■□□□ 1.31
PGK1P00558 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PGK1P00558 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.22■■□□□ 1.31
PGK1P00558 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.22■■□□□ 1.31
PGK1P00558 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
PGK1P00558 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
PGK1P00558 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.22■■□□□ 1.31
PGK1P00558 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.22■■□□□ 1.31
PGK1P00558 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PGK1P00558 CYP21A1P-202ENST00000354927 1481 ntBASIC23.22■■□□□ 1.31
PGK1P00558 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PGK1P00558 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PGK1P00558 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PGK1P00558 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PGK1P00558 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PGK1P00558 AC211429.1-201ENST00000415277 523 ntBASIC23.21■■□□□ 1.31
PGK1P00558 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.21■■□□□ 1.31
PGK1P00558 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.21■■□□□ 1.31
PGK1P00558 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.21■■□□□ 1.31
PGK1P00558 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.21■■□□□ 1.31
PGK1P00558 REXO1L12P-201ENST00000622156 912 ntBASIC23.21■■□□□ 1.31
PGK1P00558 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.21■■□□□ 1.31
PGK1P00558 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.21■■□□□ 1.31
PGK1P00558 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms