Protein–RNA interactions for Protein: O70157

Top3a, DNA topoisomerase 3-alpha, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3aO70157 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Top3aO70157 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Top3aO70157 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top3aO70157 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Top3aO70157 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
Top3aO70157 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Top3aO70157 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Top3aO70157 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top3aO70157 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Top3aO70157 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top3aO70157 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Top3aO70157 Gm7514-201ENSMUST00000209475 934 ntBASIC18.32■□□□□ 0.52
Top3aO70157 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Top3aO70157 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Top3aO70157 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.32■□□□□ 0.52
Top3aO70157 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top3aO70157 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top3aO70157 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Top3aO70157 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Top3aO70157 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top3aO70157 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Top3aO70157 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top3aO70157 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top3aO70157 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Top3aO70157 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top3aO70157 Gm15039-201ENSMUST00000118914 875 ntBASIC18.31■□□□□ 0.52
Top3aO70157 AV356131-201ENSMUST00000206201 750 ntBASIC18.31■□□□□ 0.52
Top3aO70157 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Top3aO70157 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top3aO70157 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top3aO70157 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.31■□□□□ 0.52
Top3aO70157 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top3aO70157 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Top3aO70157 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.31■□□□□ 0.52
Top3aO70157 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top3aO70157 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.3■□□□□ 0.52
Top3aO70157 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Gm6420-201ENSMUST00000193885 723 ntBASIC18.3■□□□□ 0.52
Top3aO70157 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.3■□□□□ 0.52
Top3aO70157 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top3aO70157 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.3■□□□□ 0.52
Top3aO70157 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top3aO70157 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top3aO70157 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top3aO70157 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top3aO70157 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top3aO70157 Nespas-201ENSMUST00000143738 1083 ntBASIC18.29■□□□□ 0.52
Top3aO70157 Gm26571-201ENSMUST00000181399 666 ntBASIC18.29■□□□□ 0.52
Top3aO70157 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top3aO70157 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top3aO70157 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top3aO70157 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Top3aO70157 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top3aO70157 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Top3aO70157 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top3aO70157 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top3aO70157 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top3aO70157 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Top3aO70157 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Top3aO70157 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top3aO70157 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top3aO70157 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.28■□□□□ 0.52
Top3aO70157 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Top3aO70157 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.28■□□□□ 0.52
Top3aO70157 Gm8495-201ENSMUST00000188740 694 ntBASIC18.28■□□□□ 0.52
Top3aO70157 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.28■□□□□ 0.52
Top3aO70157 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top3aO70157 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Top3aO70157 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top3aO70157 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top3aO70157 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top3aO70157 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top3aO70157 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Top3aO70157 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.27■□□□□ 0.52
Top3aO70157 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top3aO70157 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top3aO70157 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top3aO70157 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top3aO70157 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.27■□□□□ 0.52
Top3aO70157 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top3aO70157 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top3aO70157 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.27■□□□□ 0.51
Top3aO70157 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Top3aO70157 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Top3aO70157 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Top3aO70157 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Top3aO70157 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Top3aO70157 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Top3aO70157 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms