Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.39□□□□□ -0.11
Pde6dO55057 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6dO55057 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pde6dO55057 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Pde6dO55057 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6dO55057 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6dO55057 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pde6dO55057 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.39□□□□□ -0.11
Pde6dO55057 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.39□□□□□ -0.11
Pde6dO55057 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pde6dO55057 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6dO55057 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6dO55057 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6dO55057 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6dO55057 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pde6dO55057 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.39□□□□□ -0.11
Pde6dO55057 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6dO55057 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6dO55057 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pde6dO55057 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6dO55057 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.38□□□□□ -0.11
Pde6dO55057 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pde6dO55057 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.38□□□□□ -0.11
Pde6dO55057 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6dO55057 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6dO55057 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6dO55057 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6dO55057 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6dO55057 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6dO55057 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6dO55057 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pde6dO55057 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pde6dO55057 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.37□□□□□ -0.11
Pde6dO55057 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.37□□□□□ -0.11
Pde6dO55057 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pde6dO55057 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6dO55057 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pde6dO55057 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.36□□□□□ -0.11
Pde6dO55057 Gm11175-201ENSMUST00000116172 543 ntBASIC14.36□□□□□ -0.11
Pde6dO55057 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6dO55057 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pde6dO55057 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.35□□□□□ -0.11
Pde6dO55057 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.35□□□□□ -0.11
Pde6dO55057 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pde6dO55057 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6dO55057 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pde6dO55057 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms