Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc1a4O35874 Gm11249-201ENSMUST00000117071 859 ntBASIC21.36■■□□□ 1.01
Slc1a4O35874 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slc1a4O35874 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc1a4O35874 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.36■■□□□ 1.01
Slc1a4O35874 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc1a4O35874 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc1a4O35874 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slc1a4O35874 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc1a4O35874 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Slc1a4O35874 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Slc1a4O35874 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a4O35874 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a4O35874 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a4O35874 Gm22240-201ENSMUST00000175225 82 ntBASIC21.35■■□□□ 1.01
Slc1a4O35874 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.35■■□□□ 1.01
Slc1a4O35874 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a4O35874 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a4O35874 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a4O35874 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a4O35874 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a4O35874 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a4O35874 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a4O35874 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a4O35874 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a4O35874 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a4O35874 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a4O35874 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a4O35874 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.34■■□□□ 1.01
Slc1a4O35874 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Slc1a4O35874 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a4O35874 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a4O35874 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Slc1a4O35874 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Slc1a4O35874 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Slc1a4O35874 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc1a4O35874 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc1a4O35874 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc1a4O35874 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc1a4O35874 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Slc1a4O35874 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Slc1a4O35874 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Slc1a4O35874 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc1a4O35874 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.33■■□□□ 1
Slc1a4O35874 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc1a4O35874 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc1a4O35874 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.33■■□□□ 1
Slc1a4O35874 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
Slc1a4O35874 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Slc1a4O35874 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.33■■□□□ 1
Slc1a4O35874 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc1a4O35874 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a4O35874 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a4O35874 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.32■■□□□ 1
Slc1a4O35874 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a4O35874 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a4O35874 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a4O35874 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc1a4O35874 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.31■■□□□ 1
Slc1a4O35874 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Slc1a4O35874 Gm11927-201ENSMUST00000118472 759 ntBASIC21.31■■□□□ 1
Slc1a4O35874 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Slc1a4O35874 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Slc1a4O35874 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc1a4O35874 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc1a4O35874 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc1a4O35874 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.31■■□□□ 1
Slc1a4O35874 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc1a4O35874 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Slc1a4O35874 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Slc1a4O35874 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc1a4O35874 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
Slc1a4O35874 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.3■■□□□ 1
Slc1a4O35874 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Slc1a4O35874 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.3■■□□□ 1
Slc1a4O35874 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Slc1a4O35874 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Slc1a4O35874 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc1a4O35874 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc1a4O35874 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc1a4O35874 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Slc1a4O35874 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.3■■□□□ 1
Slc1a4O35874 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Slc1a4O35874 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc1a4O35874 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc1a4O35874 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Slc1a4O35874 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc1a4O35874 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc1a4O35874 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc1a4O35874 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc1a4O35874 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc1a4O35874 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc1a4O35874 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc1a4O35874 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc1a4O35874 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Slc1a4O35874 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc1a4O35874 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc1a4O35874 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc1a4O35874 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.28■■□□□ 1
Slc1a4O35874 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 115.1 ms