Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Capn1O35350 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Capn1O35350 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.8■□□□□ 0.28
Capn1O35350 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.8■□□□□ 0.28
Capn1O35350 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Capn1O35350 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Capn1O35350 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.79■□□□□ 0.28
Capn1O35350 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Capn1O35350 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.79■□□□□ 0.28
Capn1O35350 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Gm27275-201ENSMUST00000184318 272 ntBASIC16.79■□□□□ 0.28
Capn1O35350 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.79■□□□□ 0.28
Capn1O35350 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.79■□□□□ 0.28
Capn1O35350 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Capn1O35350 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Capn1O35350 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Capn1O35350 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Capn1O35350 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Capn1O35350 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Capn1O35350 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Capn1O35350 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Capn1O35350 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.78■□□□□ 0.28
Capn1O35350 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Capn1O35350 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Capn1O35350 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Capn1O35350 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Capn1O35350 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Capn1O35350 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.78■□□□□ 0.28
Capn1O35350 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Capn1O35350 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Capn1O35350 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Capn1O35350 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Capn1O35350 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Capn1O35350 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.77■□□□□ 0.28
Capn1O35350 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Capn1O35350 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Capn1O35350 Gm12896-201ENSMUST00000118430 226 ntBASIC16.77■□□□□ 0.28
Capn1O35350 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Capn1O35350 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Capn1O35350 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Capn1O35350 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Capn1O35350 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.77■□□□□ 0.27
Capn1O35350 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Capn1O35350 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Capn1O35350 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Capn1O35350 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Capn1O35350 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Capn1O35350 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Capn1O35350 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Capn1O35350 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Capn1O35350 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.76■□□□□ 0.27
Capn1O35350 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Capn1O35350 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Capn1O35350 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Capn1O35350 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Capn1O35350 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Capn1O35350 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Capn1O35350 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Capn1O35350 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Capn1O35350 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Capn1O35350 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Capn1O35350 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Capn1O35350 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Capn1O35350 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Capn1O35350 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.75■□□□□ 0.27
Capn1O35350 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Capn1O35350 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.75■□□□□ 0.27
Capn1O35350 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.75■□□□□ 0.27
Capn1O35350 Gm10812-201ENSMUST00000099864 546 ntBASIC16.75■□□□□ 0.27
Capn1O35350 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Capn1O35350 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Capn1O35350 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Capn1O35350 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms