Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 CNN2P6-201ENST00000439038 900 ntBASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 AL138781.1-201ENST00000566567 1274 ntBASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBAL3A6NHL2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 AC092053.2-201ENST00000640557 1818 ntBASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 TSPY20P-201ENST00000450910 630 ntBASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 AC133552.2-202ENST00000575694 574 ntBASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 AC013268.1-206ENST00000638368 961 ntBASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 AC112229.1-201ENST00000639295 961 ntBASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 AC133041.1-202ENST00000642053 222 ntBASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TUBAL3A6NHL2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBAL3A6NHL2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TUBAL3A6NHL2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TUBAL3A6NHL2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.58■□□□□ 0.57
TUBAL3A6NHL2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TUBAL3A6NHL2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 AC069152.1-201ENST00000438030 544 ntBASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 SLC7A5P1-201ENST00000568957 537 ntBASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 LINC01521-201ENST00000504184 1943 ntBASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBAL3A6NHL2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 TERF1P5-201ENST00000477545 1207 ntBASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 AC053503.5-201ENST00000601508 636 ntBASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 AF106564.1-201ENST00000607058 2553 ntBASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBAL3A6NHL2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms