Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Gm11249-201ENSMUST00000117071 859 ntBASIC19.23■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.23■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Gm11927-201ENSMUST00000118472 759 ntBASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Zfp783-201ENSMUST00000095946 670 ntBASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mindy4b-psA0A1W2P7H6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Gm38285-201ENSMUST00000192928 922 ntBASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.17■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms