Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv3-3A0A140T8Q0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv3-3A0A140T8Q0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Igkv3-3A0A140T8Q0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Gm45606-201ENSMUST00000209836 2795 ntBASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv3-3A0A140T8Q0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Rncr4-201ENSMUST00000194541 2234 ntBASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Gm42501-201ENSMUST00000200220 1026 ntBASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv3-3A0A140T8Q0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Gm45141-201ENSMUST00000206502 1888 ntBASIC10.98□□□□□ -0.65
Igkv3-3A0A140T8Q0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms