Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Gm43017-201ENSMUST00000198296 752 ntBASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Gm45417-201ENSMUST00000209533 758 ntBASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Gm10461-201ENSMUST00000202073 4786 ntBASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Ighv1-56A0A0A6YXG2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms