Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav4n-4A0A075B615 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4n-4A0A075B615 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Etf1-202ENSMUST00000180351 108 ntBASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4n-4A0A075B615 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4n-4A0A075B615 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4n-4A0A075B615 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms