Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Gm37139-201ENSMUST00000192134 4419 ntBASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Gm23757-201ENSMUST00000158353 100 ntBASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Gm25690-201ENSMUST00000175439 77 ntBASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Gm6543-201ENSMUST00000197353 808 ntBASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Gm42643-201ENSMUST00000200504 279 ntBASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Gm18127-201ENSMUST00000208479 725 ntBASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Gm10115-201ENSMUST00000076071 1228 ntBASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
Col6a3E9PWQ3 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Tmem161b-206ENSMUST00000225069 2414 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gm43516-201ENSMUST00000196891 322 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gm44471-201ENSMUST00000197963 100 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gm43222-201ENSMUST00000199013 603 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gm18980-201ENSMUST00000199098 1079 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gm18469-201ENSMUST00000208850 439 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Mir409-201ENSMUST00000198153 79 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gm44132-201ENSMUST00000205142 151 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 AC154461.6-201ENSMUST00000224815 2630 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a3E9PWQ3 Gm14485-201ENSMUST00000119489 493 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm27690-201ENSMUST00000184596 126 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm4714-201ENSMUST00000203395 279 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm22826-201ENSMUST00000083774 165 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm2762-207ENSMUST00000202739 2665 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm11484-201ENSMUST00000119808 338 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm19900-201ENSMUST00000207285 576 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm45182-201ENSMUST00000207579 2404 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm8107-201ENSMUST00000117477 2009 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms