Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm11318-201ENSMUST00000118640 961 ntBASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm23894-201ENSMUST00000158107 313 ntBASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm27653-201ENSMUST00000185037 136 ntBASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm7891-201ENSMUST00000190284 843 ntBASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm18952-201ENSMUST00000194471 846 ntBASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm9292-201ENSMUST00000222008 710 ntBASIC7.71□□□□□ -1.18
Nup98Q6PFD9 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Gm8526-201ENSMUST00000079153 475 ntBASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Nup98Q6PFD9 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm14580-201ENSMUST00000119122 718 ntBASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm13604-201ENSMUST00000119332 482 ntBASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm22276-201ENSMUST00000122469 129 ntBASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm22210-201ENSMUST00000158101 144 ntBASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm20926-201ENSMUST00000194457 696 ntBASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm44213-201ENSMUST00000204977 703 ntBASIC7.7□□□□□ -1.18
Nup98Q6PFD9 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.7□□□□□ -1.18
Nup98Q6PFD9 AC154633.1-201ENSMUST00000223276 449 ntBASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm42507-201ENSMUST00000201187 2555 ntBASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.7□□□□□ -1.18
Nup98Q6PFD9 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gm7146-201ENSMUST00000116079 739 ntBASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gm11533-201ENSMUST00000120287 477 ntBASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gm14900-201ENSMUST00000120304 733 ntBASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gm16164-201ENSMUST00000160078 468 ntBASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gm42886-201ENSMUST00000199214 466 ntBASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gm38574-201ENSMUST00000211855 640 ntBASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Nup98Q6PFD9 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Nup98Q6PFD9 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms