Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.97□□□□□ -0.97
Nphp4P59240 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Nphp4P59240 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Nphp4P59240 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Gm20121-201ENSMUST00000198547 1594 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Nphp4P59240 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Nphp4P59240 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Gm12643-201ENSMUST00000116078 374 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Gm24687-201ENSMUST00000157758 241 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 Gm27512-201ENSMUST00000175328 126 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Gm21542-201ENSMUST00000182307 993 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 Gm44809-201ENSMUST00000208305 993 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 AC166574.3-201ENSMUST00000226725 367 ntBASIC8.97□□□□□ -0.97
Nphp4P59240 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Nphp4P59240 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Nphp4P59240 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Nphp4P59240 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Nphp4P59240 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.96□□□□□ -0.97
Nphp4P59240 Gm45073-201ENSMUST00000207688 4247 ntBASIC8.96□□□□□ -0.97
Nphp4P59240 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Nphp4P59240 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Nphp4P59240 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Nphp4P59240 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC8.96□□□□□ -0.98
Nphp4P59240 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Gm10826-201ENSMUST00000215366 3304 ntBASIC8.96□□□□□ -0.98
Nphp4P59240 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Gm15332-201ENSMUST00000118386 357 ntBASIC8.96□□□□□ -0.98
Nphp4P59240 Gm12262-201ENSMUST00000119915 305 ntBASIC8.96□□□□□ -0.98
Nphp4P59240 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC8.96□□□□□ -0.98
Nphp4P59240 Gm28428-201ENSMUST00000188886 697 ntBASIC8.96□□□□□ -0.98
Nphp4P59240 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Nphp4P59240 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Nphp4P59240 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Nphp4P59240 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC8.96□□□□□ -0.98
Nphp4P59240 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC8.96□□□□□ -0.98
Nphp4P59240 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nphp4P59240 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC8.95□□□□□ -0.98
Nphp4P59240 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC8.95□□□□□ -0.98
Nphp4P59240 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.95□□□□□ -0.98
Nphp4P59240 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Nphp4P59240 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nphp4P59240 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nphp4P59240 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Nphp4P59240 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nphp4P59240 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC8.95□□□□□ -0.98
Nphp4P59240 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Nphp4P59240 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Nphp4P59240 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nphp4P59240 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nphp4P59240 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Nphp4P59240 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nphp4P59240 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Nphp4P59240 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Nphp4P59240 Gm8869-201ENSMUST00000195222 947 ntBASIC8.95□□□□□ -0.98
Nphp4P59240 Gm17824-201ENSMUST00000197690 805 ntBASIC8.95□□□□□ -0.98
Nphp4P59240 Gm18851-201ENSMUST00000210087 1058 ntBASIC8.95□□□□□ -0.98
Nphp4P59240 Gm45485-201ENSMUST00000211229 357 ntBASIC8.95□□□□□ -0.98
Nphp4P59240 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Nphp4P59240 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Nphp4P59240 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Nphp4P59240 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 Gm15016-201ENSMUST00000117300 720 ntBASIC8.94□□□□□ -0.98
Nphp4P59240 Gm12565-201ENSMUST00000119004 649 ntBASIC8.94□□□□□ -0.98
Nphp4P59240 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC8.94□□□□□ -0.98
Nphp4P59240 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Nphp4P59240 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC8.94□□□□□ -0.98
Nphp4P59240 Gm26346-201ENSMUST00000157525 329 ntBASIC8.94□□□□□ -0.98
Nphp4P59240 Gm23896-201ENSMUST00000158109 130 ntBASIC8.94□□□□□ -0.98
Nphp4P59240 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 125.2 ms