Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm23910-201ENSMUST00000104597 132 ntBASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm15158-201ENSMUST00000120577 570 ntBASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm25824-201ENSMUST00000157092 121 ntBASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm24719-201ENSMUST00000157520 110 ntBASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm43160-201ENSMUST00000196453 421 ntBASIC6.83□□□□□ -1.32
Col4a6B1AVK5 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.83□□□□□ -1.32
Col4a6B1AVK5 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col4a6B1AVK5 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm13890-201ENSMUST00000117578 390 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm13930-201ENSMUST00000118569 368 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm13626-201ENSMUST00000119435 402 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Scarna6-201ENSMUST00000158656 265 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm19560-201ENSMUST00000177510 514 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm7745-201ENSMUST00000182235 973 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm37375-201ENSMUST00000193859 387 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm37385-201ENSMUST00000195223 387 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm43798-201ENSMUST00000202056 394 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col4a6B1AVK5 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Grik1-210ENSMUST00000228034 2708 ntBASIC6.81□□□□□ -1.32
Col4a6B1AVK5 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Gm7146-201ENSMUST00000116079 739 ntBASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Gm14294-201ENSMUST00000119749 751 ntBASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Gm13207-201ENSMUST00000119862 773 ntBASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Gm25459-201ENSMUST00000157953 114 ntBASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.81□□□□□ -1.32
Col4a6B1AVK5 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.81□□□□□ -1.32
Col4a6B1AVK5 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.81□□□□□ -1.32
Col4a6B1AVK5 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.81□□□□□ -1.32
Col4a6B1AVK5 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms