Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm44769-201ENSMUST00000206120 2809 ntBASIC6.7□□□□□ -1.34
Lire1P11260 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Lire1P11260 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Lire1P11260 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 Gm12442-201ENSMUST00000118372 338 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm11416-201ENSMUST00000119111 863 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm5759-201ENSMUST00000119203 811 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm13735-201ENSMUST00000120217 670 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm11726-201ENSMUST00000121028 424 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm13828-201ENSMUST00000122278 363 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm12152-201ENSMUST00000122465 684 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC6.7□□□□□ -1.34
Lire1P11260 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.7□□□□□ -1.34
Lire1P11260 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Gm22552-201ENSMUST00000157796 337 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Gm27185-201ENSMUST00000184296 247 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm7436-201ENSMUST00000187229 391 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm29143-201ENSMUST00000189462 201 ntBASIC6.7□□□□□ -1.34
Lire1P11260 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.7□□□□□ -1.34
Lire1P11260 Gm34144-201ENSMUST00000197039 259 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm44590-201ENSMUST00000206161 391 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm45198-201ENSMUST00000206796 591 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm9652-201ENSMUST00000209345 163 ntBASIC6.7□□□□□ -1.34
Lire1P11260 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.7□□□□□ -1.34
Lire1P11260 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Lire1P11260 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Gm25189-201ENSMUST00000083911 164 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Lire1P11260 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Lire1P11260 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.7□□□□□ -1.34
Lire1P11260 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.7□□□□□ -1.34
Lire1P11260 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Lire1P11260 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.69□□□□□ -1.34
Lire1P11260 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.69□□□□□ -1.34
Lire1P11260 Gm28649-201ENSMUST00000189153 1581 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Lire1P11260 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Lire1P11260 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Lire1P11260 Gm44228-201ENSMUST00000204888 2026 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Lire1P11260 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Gm28240-201ENSMUST00000187560 2053 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
Lire1P11260 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Lire1P11260 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Lire1P11260 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Gm15778-201ENSMUST00000118469 608 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Gm12630-201ENSMUST00000121575 784 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Gm25989-201ENSMUST00000158761 133 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Gm6434-201ENSMUST00000163316 372 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC6.69□□□□□ -1.34
Lire1P11260 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.69□□□□□ -1.34
Lire1P11260 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.69□□□□□ -1.34
Lire1P11260 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms