Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Gm37138-201ENSMUST00000194564 2089 ntBASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Tcf24-201ENSMUST00000097824 2639 ntBASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Gm24343-201ENSMUST00000158708 111 ntBASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Gm7343-201ENSMUST00000194510 1061 ntBASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Igkv4-83-201ENSMUST00000196933 334 ntBASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 CT009556.1-201ENSMUST00000227282 449 ntBASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 n-R5s58-201ENSMUST00000093682 119 ntBASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc180J3QNE4 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Gm26289-201ENSMUST00000104169 131 ntBASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Gm14529-201ENSMUST00000117894 406 ntBASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Gm15300-201ENSMUST00000122324 279 ntBASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Gm26346-201ENSMUST00000157525 329 ntBASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Gm23632-201ENSMUST00000175289 125 ntBASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Gm7492-201ENSMUST00000201745 725 ntBASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 AC154861.1-201ENSMUST00000223767 800 ntBASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 AC168062.1-201ENSMUST00000228048 769 ntBASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Gm25133-201ENSMUST00000082647 130 ntBASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc180J3QNE4 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc180J3QNE4 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc180J3QNE4 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc180J3QNE4 Gm10855-201ENSMUST00000100426 2541 ntBASIC12.27□□□□□ -0.44
Ccdc180J3QNE4 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc180J3QNE4 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc180J3QNE4 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc180J3QNE4 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc180J3QNE4 Gm28667-201ENSMUST00000189873 2171 ntBASIC12.27□□□□□ -0.45
Ccdc180J3QNE4 Gm43880-201ENSMUST00000203635 2162 ntBASIC12.27□□□□□ -0.45
Ccdc180J3QNE4 Gm3076-201ENSMUST00000161613 451 ntBASIC12.27□□□□□ -0.45
Ccdc180J3QNE4 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC12.27□□□□□ -0.45
Ccdc180J3QNE4 Mir7653-201ENSMUST00000184358 61 ntBASIC12.27□□□□□ -0.45
Ccdc180J3QNE4 Gm46364-201ENSMUST00000218548 319 ntBASIC12.27□□□□□ -0.45
Ccdc180J3QNE4 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc180J3QNE4 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm24434-201ENSMUST00000104081 132 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm15158-201ENSMUST00000120577 570 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm23276-201ENSMUST00000157913 138 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm17366-201ENSMUST00000167629 187 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Mir6971-201ENSMUST00000183497 63 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm37493-201ENSMUST00000193167 433 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm9517-201ENSMUST00000195021 874 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm44111-201ENSMUST00000204649 399 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm33178-201ENSMUST00000212090 257 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 AC131795.1-201ENSMUST00000219632 426 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 AC154646.1-201ENSMUST00000225011 1092 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 AC140393.3-201ENSMUST00000228396 1352 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms