Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.91□□□□□ -1.14
Col1a1P11087 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col1a1P11087 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Gm14805-201ENSMUST00000120172 340 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Gm12754-201ENSMUST00000121908 454 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Gm25433-201ENSMUST00000158283 286 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Gm20691-201ENSMUST00000176889 333 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Mir7674-201ENSMUST00000184964 63 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC7.91□□□□□ -1.14
Col1a1P11087 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC7.91□□□□□ -1.14
Col1a1P11087 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Gm15903-202ENSMUST00000199631 3518 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.9□□□□□ -1.14
Col1a1P11087 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Col1a1P11087 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.9□□□□□ -1.14
Col1a1P11087 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm8872-201ENSMUST00000197475 1341 ntBASIC7.9□□□□□ -1.14
Col1a1P11087 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
Col1a1P11087 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm13006-201ENSMUST00000118683 214 ntBASIC7.9□□□□□ -1.14
Col1a1P11087 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm5119-201ENSMUST00000215858 634 ntBASIC7.9□□□□□ -1.14
Col1a1P11087 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.9□□□□□ -1.14
Col1a1P11087 AC157572.4-201ENSMUST00000228203 549 ntBASIC7.9□□□□□ -1.14
Col1a1P11087 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.9□□□□□ -1.14
Col1a1P11087 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC7.9□□□□□ -1.14
Col1a1P11087 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col1a1P11087 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Col1a1P11087 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Col1a1P11087 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Col1a1P11087 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Col1a1P11087 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Col1a1P11087 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col1a1P11087 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col1a1P11087 Gm26289-201ENSMUST00000104169 131 ntBASIC7.89□□□□□ -1.15
Col1a1P11087 Gm15621-201ENSMUST00000119162 364 ntBASIC7.89□□□□□ -1.15
Col1a1P11087 Gm10416-201ENSMUST00000197379 645 ntBASIC7.89□□□□□ -1.15
Col1a1P11087 n-TStga1-201ENSMUST00000199903 109 ntBASIC7.89□□□□□ -1.15
Col1a1P11087 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.89□□□□□ -1.15
Col1a1P11087 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC7.89□□□□□ -1.15
Col1a1P11087 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col1a1P11087 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.89□□□□□ -1.15
Col1a1P11087 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.89□□□□□ -1.15
Col1a1P11087 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Col1a1P11087 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col1a1P11087 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 126.2 ms