Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm8822-201ENSMUST00000118948 2347 ntBASIC7.1□□□□□ -1.27
Nkx6-1Q99MA9 Gm37078-201ENSMUST00000193314 2009 ntBASIC7.1□□□□□ -1.27
Nkx6-1Q99MA9 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Nkx6-1Q99MA9 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Nkx6-1Q99MA9 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm38029-201ENSMUST00000192669 2090 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm17170-201ENSMUST00000112785 316 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm13243-201ENSMUST00000117481 565 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm13229-201ENSMUST00000118238 340 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm12944-201ENSMUST00000119262 463 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm14863-201ENSMUST00000119648 307 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm9435-201ENSMUST00000120379 877 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm12903-201ENSMUST00000121015 544 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm12444-201ENSMUST00000121512 877 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm13221-201ENSMUST00000121712 430 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm4725-201ENSMUST00000151048 587 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm24768-201ENSMUST00000158512 94 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm27155-201ENSMUST00000183716 898 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 AC099760.1-201ENSMUST00000196300 153 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm29745-201ENSMUST00000198005 687 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm19137-201ENSMUST00000213790 1164 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 AL671874.1-201ENSMUST00000223746 1123 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 AC161275.1-201ENSMUST00000224668 208 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 AC160962.2-201ENSMUST00000224761 632 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 AC126251.1-201ENSMUST00000228170 2707 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm45634-201ENSMUST00000209736 1990 ntBASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Nkx6-1Q99MA9 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Nkx6-1Q99MA9 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Nkx6-1Q99MA9 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Nkx6-1Q99MA9 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Nkx6-1Q99MA9 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC7.09□□□□□ -1.28
Nkx6-1Q99MA9 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Nkx6-1Q99MA9 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm7680-201ENSMUST00000216198 1348 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms