Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Tgds-204ENSMUST00000228543 1594 ntBASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfrsf13bQ9ET35 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Gm43173-201ENSMUST00000202246 593 ntBASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfrsf13bQ9ET35 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Mir7075-201ENSMUST00000184187 82 ntBASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfrsf13bQ9ET35 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfrsf13bQ9ET35 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.33□□□□□ -0.11
Tnfrsf13bQ9ET35 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfrsf13bQ9ET35 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfrsf13bQ9ET35 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfrsf13bQ9ET35 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfrsf13bQ9ET35 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfrsf13bQ9ET35 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf13bQ9ET35 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf13bQ9ET35 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf13bQ9ET35 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tnfrsf13bQ9ET35 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf13bQ9ET35 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfrsf13bQ9ET35 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms