Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ap3s1Q9DCR2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ap3s1Q9DCR2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ap3s1Q9DCR2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ap3s1Q9DCR2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ap3s1Q9DCR2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ap3s1Q9DCR2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ap3s1Q9DCR2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ap3s1Q9DCR2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ap3s1Q9DCR2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ap3s1Q9DCR2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ap3s1Q9DCR2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ap3s1Q9DCR2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ap3s1Q9DCR2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms