Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ssbp1Q9CYR0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ssbp1Q9CYR0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ssbp1Q9CYR0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ssbp1Q9CYR0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Gm16437-201ENSMUST00000025669 507 ntBASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ssbp1Q9CYR0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Scarna2-201ENSMUST00000157560 414 ntBASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Gm8969-201ENSMUST00000199694 526 ntBASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Gm9806-201ENSMUST00000051080 552 ntBASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ssbp1Q9CYR0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms