Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.81■□□□□ 0.44
Trim16Q99PP9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Trim16Q99PP9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim16Q99PP9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim16Q99PP9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim16Q99PP9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim16Q99PP9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim16Q99PP9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim16Q99PP9 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.79■□□□□ 0.44
Trim16Q99PP9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim16Q99PP9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.79■□□□□ 0.44
Trim16Q99PP9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim16Q99PP9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim16Q99PP9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim16Q99PP9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim16Q99PP9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim16Q99PP9 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.78■□□□□ 0.44
Trim16Q99PP9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Gm7514-201ENSMUST00000209475 934 ntBASIC17.77■□□□□ 0.44
Trim16Q99PP9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim16Q99PP9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trim16Q99PP9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim16Q99PP9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.77■□□□□ 0.43
Trim16Q99PP9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Trim16Q99PP9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trim16Q99PP9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trim16Q99PP9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Grk6-206ENSMUST00000224995 2971 ntBASIC17.76■□□□□ 0.43
Trim16Q99PP9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim16Q99PP9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Gm27405-201ENSMUST00000184201 112 ntBASIC17.76■□□□□ 0.43
Trim16Q99PP9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms