Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Gm15039-201ENSMUST00000118914 875 ntBASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Gm13534-201ENSMUST00000121169 513 ntBASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga3Q91XY5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhga3Q91XY5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Gm10033-202ENSMUST00000211874 928 ntBASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.23■□□□□ 0.19
Pcdhga3Q91XY5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhga3Q91XY5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhga3Q91XY5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhga3Q91XY5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhga3Q91XY5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Pcdhga3Q91XY5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms