Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb5Q91XX5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb5Q91XX5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb5Q91XX5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb5Q91XX5 Gm7977-201ENSMUST00000193787 748 ntBASIC18.11■□□□□ 0.49
Pcdhgb5Q91XX5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb5Q91XX5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhgb5Q91XX5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb5Q91XX5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb5Q91XX5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb5Q91XX5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb5Q91XX5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb5Q91XX5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb5Q91XX5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb5Q91XX5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhgb5Q91XX5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.09■□□□□ 0.49
Pcdhgb5Q91XX5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb5Q91XX5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb5Q91XX5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb5Q91XX5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Pcdhgb5Q91XX5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb5Q91XX5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Mtag2-201ENSMUST00000058665 714 ntBASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb5Q91XX5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Gm15565-201ENSMUST00000118890 427 ntBASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb5Q91XX5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Gm15375-201ENSMUST00000119510 849 ntBASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Gm38285-201ENSMUST00000192928 922 ntBASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb5Q91XX5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms