Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb11Q91UZ8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Gm26524-201ENSMUST00000192339 390 ntBASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Gm10602-201ENSMUST00000098239 609 ntBASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb11Q91UZ8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb11Q91UZ8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb11Q91UZ8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb11Q91UZ8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb11Q91UZ8 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.72■□□□□ 0.59
Pcdhb11Q91UZ8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb11Q91UZ8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb11Q91UZ8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Gm22325-201ENSMUST00000158904 308 ntBASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb11Q91UZ8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhb11Q91UZ8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb11Q91UZ8 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb11Q91UZ8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb11Q91UZ8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb11Q91UZ8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms