Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.3■□□□□ 0.04
H1fooQ8VIK3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H1fooQ8VIK3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H1fooQ8VIK3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H1fooQ8VIK3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H1fooQ8VIK3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H1fooQ8VIK3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H1fooQ8VIK3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H1fooQ8VIK3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H1fooQ8VIK3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H1fooQ8VIK3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Gm18671-201ENSMUST00000214826 683 ntBASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
H1fooQ8VIK3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H1fooQ8VIK3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H1fooQ8VIK3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H1fooQ8VIK3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H1fooQ8VIK3 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.27■□□□□ 0.04
H1fooQ8VIK3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
H1fooQ8VIK3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.27■□□□□ 0.04
H1fooQ8VIK3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H1fooQ8VIK3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H1fooQ8VIK3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H1fooQ8VIK3 Gm5874-201ENSMUST00000096101 508 ntBASIC15.27■□□□□ 0.04
H1fooQ8VIK3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
H1fooQ8VIK3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H1fooQ8VIK3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
H1fooQ8VIK3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
H1fooQ8VIK3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H1fooQ8VIK3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
H1fooQ8VIK3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H1fooQ8VIK3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H1fooQ8VIK3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
H1fooQ8VIK3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H1fooQ8VIK3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
H1fooQ8VIK3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.26■□□□□ 0.03
H1fooQ8VIK3 Gm42642-201ENSMUST00000200683 355 ntBASIC15.26■□□□□ 0.03
H1fooQ8VIK3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H1fooQ8VIK3 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.26■□□□□ 0.03
H1fooQ8VIK3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
H1fooQ8VIK3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
H1fooQ8VIK3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H1fooQ8VIK3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
H1fooQ8VIK3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H1fooQ8VIK3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H1fooQ8VIK3 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.25■□□□□ 0.03
H1fooQ8VIK3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H1fooQ8VIK3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms