Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim60Q8VI40 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Trim60Q8VI40 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim60Q8VI40 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim60Q8VI40 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Trim60Q8VI40 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim60Q8VI40 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim60Q8VI40 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim60Q8VI40 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim60Q8VI40 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.92■□□□□ 0.62
Trim60Q8VI40 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim60Q8VI40 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim60Q8VI40 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim60Q8VI40 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim60Q8VI40 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim60Q8VI40 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim60Q8VI40 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim60Q8VI40 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim60Q8VI40 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim60Q8VI40 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim60Q8VI40 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trim60Q8VI40 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.91■□□□□ 0.62
Trim60Q8VI40 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.91■□□□□ 0.62
Trim60Q8VI40 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Trim60Q8VI40 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.91■□□□□ 0.62
Trim60Q8VI40 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim60Q8VI40 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.9■□□□□ 0.62
Trim60Q8VI40 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.9■□□□□ 0.62
Trim60Q8VI40 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trim60Q8VI40 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim60Q8VI40 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim60Q8VI40 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim60Q8VI40 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim60Q8VI40 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.89■□□□□ 0.61
Trim60Q8VI40 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trim60Q8VI40 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim60Q8VI40 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trim60Q8VI40 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.89■□□□□ 0.61
Trim60Q8VI40 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim60Q8VI40 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trim60Q8VI40 Gm13146-201ENSMUST00000118508 780 ntBASIC18.88■□□□□ 0.61
Trim60Q8VI40 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim60Q8VI40 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim60Q8VI40 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim60Q8VI40 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim60Q8VI40 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim60Q8VI40 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim60Q8VI40 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim60Q8VI40 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim60Q8VI40 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.87■□□□□ 0.61
Trim60Q8VI40 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trim60Q8VI40 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim60Q8VI40 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trim60Q8VI40 Gm9988-201ENSMUST00000069786 435 ntBASIC18.87■□□□□ 0.61
Trim60Q8VI40 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim60Q8VI40 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim60Q8VI40 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim60Q8VI40 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim60Q8VI40 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.86■□□□□ 0.61
Trim60Q8VI40 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim60Q8VI40 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.86■□□□□ 0.61
Trim60Q8VI40 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms