Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Gm22325-201ENSMUST00000158904 308 ntBASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Reep4-203ENSMUST00000226563 1444 ntBASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.68■□□□□ 0.42
Vps4aQ8VEJ9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.67■□□□□ 0.42
Vps4aQ8VEJ9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Gm8520-201ENSMUST00000186517 868 ntBASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4aQ8VEJ9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4aQ8VEJ9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4aQ8VEJ9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Gm10252-201ENSMUST00000209541 832 ntBASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4aQ8VEJ9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4aQ8VEJ9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms