Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rdh1Q8CGV4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Gm15378-201ENSMUST00000121894 207 ntBASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Gm38285-201ENSMUST00000192928 922 ntBASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rdh1Q8CGV4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rdh1Q8CGV4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rdh1Q8CGV4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh1Q8CGV4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.7■□□□□ 0.42
Rdh1Q8CGV4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh1Q8CGV4 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.7■□□□□ 0.42
Rdh1Q8CGV4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh1Q8CGV4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh1Q8CGV4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh1Q8CGV4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh1Q8CGV4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rdh1Q8CGV4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rdh1Q8CGV4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms