Protein–RNA interactions for Protein: Q8CC27

Cacnb2, Voltage-dependent L-type calcium channel subunit beta-2, mousemouse

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb2Q8CC27 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacnb2Q8CC27 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Cacnb2Q8CC27 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cacnb2Q8CC27 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacnb2Q8CC27 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cacnb2Q8CC27 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.83■□□□□ 0.6
Cacnb2Q8CC27 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cacnb2Q8CC27 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb2Q8CC27 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.83■□□□□ 0.6
Cacnb2Q8CC27 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb2Q8CC27 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.83■□□□□ 0.6
Cacnb2Q8CC27 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Cacnb2Q8CC27 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb2Q8CC27 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cacnb2Q8CC27 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cacnb2Q8CC27 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb2Q8CC27 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb2Q8CC27 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb2Q8CC27 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb2Q8CC27 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb2Q8CC27 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cacnb2Q8CC27 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb2Q8CC27 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cacnb2Q8CC27 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb2Q8CC27 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cacnb2Q8CC27 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb2Q8CC27 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb2Q8CC27 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb2Q8CC27 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb2Q8CC27 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb2Q8CC27 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb2Q8CC27 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb2Q8CC27 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb2Q8CC27 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb2Q8CC27 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb2Q8CC27 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb2Q8CC27 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb2Q8CC27 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb2Q8CC27 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb2Q8CC27 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb2Q8CC27 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb2Q8CC27 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb2Q8CC27 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.8■□□□□ 0.6
Cacnb2Q8CC27 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.8■□□□□ 0.6
Cacnb2Q8CC27 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb2Q8CC27 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb2Q8CC27 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb2Q8CC27 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cacnb2Q8CC27 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb2Q8CC27 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb2Q8CC27 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Gm38285-201ENSMUST00000192928 922 ntBASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb2Q8CC27 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb2Q8CC27 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb2Q8CC27 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb2Q8CC27 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb2Q8CC27 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.76■□□□□ 0.59
Cacnb2Q8CC27 Gm37055-201ENSMUST00000191866 133 ntBASIC18.76■□□□□ 0.59
Cacnb2Q8CC27 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacnb2Q8CC27 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms