Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vrk1Q80X41 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vrk1Q80X41 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.4■□□□□ 0.38
Vrk1Q80X41 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vrk1Q80X41 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Vrk1Q80X41 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Vrk1Q80X41 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Vrk1Q80X41 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.39■□□□□ 0.38
Vrk1Q80X41 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vrk1Q80X41 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.39■□□□□ 0.37
Vrk1Q80X41 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.39■□□□□ 0.37
Vrk1Q80X41 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vrk1Q80X41 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.39■□□□□ 0.37
Vrk1Q80X41 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vrk1Q80X41 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vrk1Q80X41 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.38■□□□□ 0.37
Vrk1Q80X41 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vrk1Q80X41 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.38■□□□□ 0.37
Vrk1Q80X41 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vrk1Q80X41 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vrk1Q80X41 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Vrk1Q80X41 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.38■□□□□ 0.37
Vrk1Q80X41 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vrk1Q80X41 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vrk1Q80X41 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vrk1Q80X41 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vrk1Q80X41 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Vrk1Q80X41 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vrk1Q80X41 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vrk1Q80X41 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vrk1Q80X41 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vrk1Q80X41 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vrk1Q80X41 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vrk1Q80X41 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vrk1Q80X41 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vrk1Q80X41 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.37■□□□□ 0.37
Vrk1Q80X41 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Vrk1Q80X41 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vrk1Q80X41 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vrk1Q80X41 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.35■□□□□ 0.37
Vrk1Q80X41 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vrk1Q80X41 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vrk1Q80X41 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vrk1Q80X41 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vrk1Q80X41 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vrk1Q80X41 Mtag2-201ENSMUST00000058665 714 ntBASIC17.34■□□□□ 0.37
Vrk1Q80X41 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vrk1Q80X41 Zfp783-201ENSMUST00000095946 670 ntBASIC17.34■□□□□ 0.37
Vrk1Q80X41 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vrk1Q80X41 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vrk1Q80X41 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vrk1Q80X41 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vrk1Q80X41 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vrk1Q80X41 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms