Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf40bQ80W14 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.03■□□□□ 0.96
Prpf40bQ80W14 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Prpf40bQ80W14 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf40bQ80W14 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.02■□□□□ 0.96
Prpf40bQ80W14 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf40bQ80W14 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf40bQ80W14 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf40bQ80W14 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf40bQ80W14 Mir5122-201ENSMUST00000175004 89 ntBASIC21.02■□□□□ 0.96
Prpf40bQ80W14 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf40bQ80W14 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf40bQ80W14 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf40bQ80W14 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Prpf40bQ80W14 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Prpf40bQ80W14 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Prpf40bQ80W14 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.01■□□□□ 0.95
Prpf40bQ80W14 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Gm5417-201ENSMUST00000079706 384 ntBASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.01■□□□□ 0.95
Prpf40bQ80W14 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf40bQ80W14 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf40bQ80W14 Gm37352-201ENSMUST00000193908 2181 ntBASIC21■□□□□ 0.95
Prpf40bQ80W14 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Prpf40bQ80W14 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf40bQ80W14 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prpf40bQ80W14 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21■□□□□ 0.95
Prpf40bQ80W14 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf40bQ80W14 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Prpf40bQ80W14 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf40bQ80W14 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf40bQ80W14 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf40bQ80W14 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf40bQ80W14 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf40bQ80W14 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf40bQ80W14 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf40bQ80W14 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf40bQ80W14 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Prpf40bQ80W14 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Prpf40bQ80W14 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf40bQ80W14 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.98■□□□□ 0.95
Prpf40bQ80W14 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Prpf40bQ80W14 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf40bQ80W14 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf40bQ80W14 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf40bQ80W14 BC021767-201ENSMUST00000126387 1716 ntBASIC20.98■□□□□ 0.95
Prpf40bQ80W14 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf40bQ80W14 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Gm13158-201ENSMUST00000122007 736 ntBASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Gm7367-201ENSMUST00000057611 492 ntBASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Prpf40bQ80W14 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms