Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Gm7291-201ENSMUST00000199147 382 ntBASIC17.77■□□□□ 0.44
Scn4bQ7M729 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.77■□□□□ 0.44
Scn4bQ7M729 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Scn4bQ7M729 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn4bQ7M729 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn4bQ7M729 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn4bQ7M729 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Grk6-206ENSMUST00000224995 2971 ntBASIC17.76■□□□□ 0.43
Scn4bQ7M729 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.76■□□□□ 0.43
Scn4bQ7M729 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn4bQ7M729 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn4bQ7M729 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.74■□□□□ 0.43
Scn4bQ7M729 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn4bQ7M729 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn4bQ7M729 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn4bQ7M729 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scn4bQ7M729 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn4bQ7M729 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.73■□□□□ 0.43
Scn4bQ7M729 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scn4bQ7M729 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn4bQ7M729 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn4bQ7M729 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn4bQ7M729 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.73■□□□□ 0.43
Scn4bQ7M729 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.73■□□□□ 0.43
Scn4bQ7M729 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn4bQ7M729 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Fst-202ENSMUST00000223640 2612 ntBASIC17.72■□□□□ 0.43
Scn4bQ7M729 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn4bQ7M729 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms