Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Commd3Q63829 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.23■□□□□ 0.03
Commd3Q63829 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Commd3Q63829 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Commd3Q63829 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Commd3Q63829 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Commd3Q63829 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Commd3Q63829 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Commd3Q63829 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Commd3Q63829 Serp2-204ENSMUST00000228055 705 ntBASIC15.22■□□□□ 0.03
Commd3Q63829 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Commd3Q63829 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Commd3Q63829 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Commd3Q63829 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.22■□□□□ 0.03
Commd3Q63829 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Commd3Q63829 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.22■□□□□ 0.03
Commd3Q63829 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Commd3Q63829 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Commd3Q63829 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Commd3Q63829 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Commd3Q63829 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Commd3Q63829 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Commd3Q63829 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Commd3Q63829 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Commd3Q63829 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Commd3Q63829 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Commd3Q63829 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Commd3Q63829 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Commd3Q63829 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Commd3Q63829 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Commd3Q63829 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.21■□□□□ 0.03
Commd3Q63829 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Commd3Q63829 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Commd3Q63829 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.21■□□□□ 0.02
Commd3Q63829 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Commd3Q63829 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Commd3Q63829 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.2■□□□□ 0.02
Commd3Q63829 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.2■□□□□ 0.02
Commd3Q63829 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Commd3Q63829 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Commd3Q63829 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.2■□□□□ 0.02
Commd3Q63829 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Commd3Q63829 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms