Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.43■□□□□ 0.38
CishQ62225 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.43■□□□□ 0.38
CishQ62225 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CishQ62225 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.43■□□□□ 0.38
CishQ62225 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CishQ62225 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CishQ62225 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CishQ62225 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CishQ62225 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CishQ62225 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CishQ62225 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CishQ62225 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CishQ62225 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CishQ62225 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.42■□□□□ 0.38
CishQ62225 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.42■□□□□ 0.38
CishQ62225 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.42■□□□□ 0.38
CishQ62225 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CishQ62225 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CishQ62225 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CishQ62225 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CishQ62225 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CishQ62225 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CishQ62225 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CishQ62225 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CishQ62225 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CishQ62225 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.42■□□□□ 0.38
CishQ62225 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CishQ62225 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.41■□□□□ 0.38
CishQ62225 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CishQ62225 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CishQ62225 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CishQ62225 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CishQ62225 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CishQ62225 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CishQ62225 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CishQ62225 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.41■□□□□ 0.38
CishQ62225 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.41■□□□□ 0.38
CishQ62225 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.41■□□□□ 0.38
CishQ62225 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CishQ62225 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CishQ62225 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CishQ62225 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CishQ62225 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CishQ62225 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CishQ62225 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CishQ62225 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CishQ62225 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CishQ62225 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CishQ62225 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.4■□□□□ 0.38
CishQ62225 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CishQ62225 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CishQ62225 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.4■□□□□ 0.38
CishQ62225 Gm2399-201ENSMUST00000104944 225 ntBASIC17.4■□□□□ 0.38
CishQ62225 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CishQ62225 Gm2559-201ENSMUST00000201323 363 ntBASIC17.4■□□□□ 0.38
CishQ62225 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CishQ62225 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CishQ62225 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CishQ62225 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.4■□□□□ 0.38
CishQ62225 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CishQ62225 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CishQ62225 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.39■□□□□ 0.38
CishQ62225 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.39■□□□□ 0.38
CishQ62225 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CishQ62225 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.39■□□□□ 0.37
CishQ62225 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CishQ62225 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CishQ62225 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CishQ62225 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.39■□□□□ 0.37
CishQ62225 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CishQ62225 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CishQ62225 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CishQ62225 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.39■□□□□ 0.37
CishQ62225 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.39■□□□□ 0.37
CishQ62225 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CishQ62225 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CishQ62225 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CishQ62225 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
CishQ62225 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CishQ62225 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CishQ62225 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CishQ62225 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CishQ62225 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.38■□□□□ 0.37
CishQ62225 Gm20049-201ENSMUST00000219950 730 ntBASIC17.38■□□□□ 0.37
CishQ62225 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.38■□□□□ 0.37
CishQ62225 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CishQ62225 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CishQ62225 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CishQ62225 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CishQ62225 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CishQ62225 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
CishQ62225 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CishQ62225 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CishQ62225 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CishQ62225 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.37■□□□□ 0.37
CishQ62225 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CishQ62225 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CishQ62225 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.37■□□□□ 0.37
CishQ62225 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CishQ62225 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms