Protein–RNA interactions for Protein: Q61136

Prpf4b, Serine/threonine-protein kinase PRP4 homolog, mousemouse

Known RBP Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4bQ61136 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf4bQ61136 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf4bQ61136 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf4bQ61136 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf4bQ61136 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf4bQ61136 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf4bQ61136 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf4bQ61136 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf4bQ61136 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.9■□□□□ 0.94
Prpf4bQ61136 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.9■□□□□ 0.94
Prpf4bQ61136 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf4bQ61136 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Prpf4bQ61136 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf4bQ61136 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Prpf4bQ61136 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf4bQ61136 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf4bQ61136 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf4bQ61136 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf4bQ61136 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf4bQ61136 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.89■□□□□ 0.93
Prpf4bQ61136 Gm13146-201ENSMUST00000118508 780 ntBASIC20.89■□□□□ 0.93
Prpf4bQ61136 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf4bQ61136 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Prpf4bQ61136 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf4bQ61136 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Prpf4bQ61136 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Prpf4bQ61136 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf4bQ61136 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf4bQ61136 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Prpf4bQ61136 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf4bQ61136 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf4bQ61136 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf4bQ61136 Rarb-207ENSMUST00000225921 2756 ntBASIC20.88■□□□□ 0.93
Prpf4bQ61136 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf4bQ61136 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf4bQ61136 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf4bQ61136 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf4bQ61136 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.88■□□□□ 0.93
Prpf4bQ61136 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf4bQ61136 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf4bQ61136 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf4bQ61136 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Prpf4bQ61136 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Prpf4bQ61136 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf4bQ61136 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf4bQ61136 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf4bQ61136 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf4bQ61136 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Prpf4bQ61136 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf4bQ61136 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf4bQ61136 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf4bQ61136 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf4bQ61136 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf4bQ61136 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf4bQ61136 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf4bQ61136 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Prpf4bQ61136 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf4bQ61136 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf4bQ61136 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.85■□□□□ 0.93
Prpf4bQ61136 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.85■□□□□ 0.93
Prpf4bQ61136 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf4bQ61136 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf4bQ61136 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf4bQ61136 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Prpf4bQ61136 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf4bQ61136 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf4bQ61136 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf4bQ61136 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.84■□□□□ 0.93
Prpf4bQ61136 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf4bQ61136 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf4bQ61136 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf4bQ61136 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf4bQ61136 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf4bQ61136 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms