Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cnga4Q3UW12 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cnga4Q3UW12 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cnga4Q3UW12 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnga4Q3UW12 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.53■□□□□ 0.56
Cnga4Q3UW12 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnga4Q3UW12 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cnga4Q3UW12 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cnga4Q3UW12 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cnga4Q3UW12 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnga4Q3UW12 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cnga4Q3UW12 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cnga4Q3UW12 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.49■□□□□ 0.55
Cnga4Q3UW12 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cnga4Q3UW12 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms