Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.59■□□□□ 0.73
Smcr8Q3UMB5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smcr8Q3UMB5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smcr8Q3UMB5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.58■□□□□ 0.73
Smcr8Q3UMB5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smcr8Q3UMB5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smcr8Q3UMB5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Smcr8Q3UMB5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smcr8Q3UMB5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Mir6982-201ENSMUST00000184354 68 ntBASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.55■□□□□ 0.72
Smcr8Q3UMB5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Flg-201ENSMUST00000050758 1488 ntBASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Gm13158-201ENSMUST00000122007 736 ntBASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smcr8Q3UMB5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Smcr8Q3UMB5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Gm6576-201ENSMUST00000169678 883 ntBASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Gm10698-201ENSMUST00000182663 604 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms