Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhej1Q3KNJ2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.49■□□□□ 0.71
Nhej1Q3KNJ2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nhej1Q3KNJ2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.48■□□□□ 0.71
Nhej1Q3KNJ2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nhej1Q3KNJ2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.48■□□□□ 0.71
Nhej1Q3KNJ2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.48■□□□□ 0.71
Nhej1Q3KNJ2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nhej1Q3KNJ2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nhej1Q3KNJ2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nhej1Q3KNJ2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nhej1Q3KNJ2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nhej1Q3KNJ2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nhej1Q3KNJ2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nhej1Q3KNJ2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nhej1Q3KNJ2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nhej1Q3KNJ2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nhej1Q3KNJ2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nhej1Q3KNJ2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nhej1Q3KNJ2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nhej1Q3KNJ2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nhej1Q3KNJ2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nhej1Q3KNJ2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nhej1Q3KNJ2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nhej1Q3KNJ2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nhej1Q3KNJ2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nhej1Q3KNJ2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nhej1Q3KNJ2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Nhej1Q3KNJ2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Nhej1Q3KNJ2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nhej1Q3KNJ2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nhej1Q3KNJ2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nhej1Q3KNJ2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nhej1Q3KNJ2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nhej1Q3KNJ2 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.43■□□□□ 0.7
Nhej1Q3KNJ2 Gm13146-201ENSMUST00000118508 780 ntBASIC19.43■□□□□ 0.7
Nhej1Q3KNJ2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nhej1Q3KNJ2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nhej1Q3KNJ2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.43■□□□□ 0.7
Nhej1Q3KNJ2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nhej1Q3KNJ2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nhej1Q3KNJ2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nhej1Q3KNJ2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nhej1Q3KNJ2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nhej1Q3KNJ2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nhej1Q3KNJ2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nhej1Q3KNJ2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.42■□□□□ 0.7
Nhej1Q3KNJ2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nhej1Q3KNJ2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nhej1Q3KNJ2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nhej1Q3KNJ2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms